admiralneuro (development version)
Template programs
- Added ADLB template scripts
ad_adlb.Rwhich creates a Laboratory Analysis Dataset. (#117)
Documentation
Added Vignette “Creating ADLB”. (#115)
Added a new vignette “Explore ADaM Templates” to the “Get Started” menu. It displays the admiralneuro templates. (#126)
A night mode option has been added to the {admiralneuro} website. This can be be toggled using the sun/moon icon in the top right corner of the navigation bar. Tooltips have also been set up for each of the icons on the navigation bar. (#125)
Various
Developer Notes
Creating the website for pull requests was enabled. Add “[create website]” to the pull request title to trigger website creation. (#125)
Fixed links in the vignettes and added the Slack invitation link to
.lycheeignorefor a successful CI/CD Links/Validate Links workflow run. (#131)Clickable links to personal websites or GitHub profiles were added in the home page sidebar for every {admiralneuro} author. Up-versioned admiraldev to 1.5.0, as the custom admiral roclets (i.e.,
roxygen_*()functions) have now been moved to admiraldev. Update to roxygen2 8.0.0. (#135)Updated ADLB template and vignette to incorporate new parameter TAU181P from updated lb_neuro in pharmaversesdtm. Added links to ADNV and ADLB vignettes in admiralneuro vignettes. (#138)
admiralneuro 0.2.1
CRAN release: 2026-02-04
Updates of Existing Functions
- Improved test coverage in
compute_centiloid()function when invalid tracer combination is provided. The function also now only accepts positive SUVR values. (#106)
Developer Notes
- Aligned the templates’ save directory with pharmaverseadam requirements. (#91)
New features
- The function
compute_upsit_percentile()calculates percentiles based on age, sex, and UPSIT scores. (# 95)
Documentation
- Vignette “Creating ADNV”. (#114)
Template programs
- ADNV template scripts
ad_adnv.Rwhich creates a Nervous System Analysis Dataset. (#113)
Various
Moved test SDTM datasets
dm_neuro,nv_neuro,suppnv_neuroandag_neurofrom admiralneuro to pharmaversesdtm. (#92)Updated the kapa.ai
data-modal-search-placeholderto “Ask me a question about {admiralneuro} or the {admiral} ecosystem…” (#119)
admiralneuro 0.1.0
CRAN release: 2025-09-14
- Initial package release mainly focused on Alzheimer’s disease specifically for the PET scan analysis.
Functions
- The function
compute_centiloid()computes centiloid values based on Amyloid PET tracer, SUVR value and pipeline, and reference region. (#21)
Documentation
- Vignette “Creating ADAPET and ADTPET”. (#19)
