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Generate a session script from settings and mapping files

Source: R/get_session_code.R
get_settings_code.Rd

This function reads a settings yaml file and data path, and generates an R script that can reproduce the session using a template.

Usage

get_settings_code(
  settings_file_path,
  data_path,
  output_path = "settings_code.R",
  template_path = system.file("shiny/www/templates/script_template.R", package = "aNCA"),
  mapping = default_mapping,
  ratio_table = data.frame()
)

Arguments

settings_file_path

Path to the yaml file containing the settings list.

data_path

Path to the data file to be referenced in the script.

output_path

Path to write the resulting script file.

template_path

Path to the R script template file. By default, uses the one installed from your aNCA package version.

mapping

Named list mapping variable names (default: default_mapping).

ratio_table

Data frame containing ratio definitions (default: empty data frame).

Value

Invisibly returns the output_path.